3D Region Growing for CT-Scan Kidney Segmentation

Abstract | Introduction | Experimental Design | Results/Analysis | Conclusion

Our segmentation results are visually satisfactory except at organ junctions. We've tried to mitigate these effects using "odd-slice" detection in pre and post processing. As a whole, the system operates faster than slice-by-slice hand segmentation and has viability for "human-in-the-loop" systems.

Future Directions:
  • Inter-slice edge interpolation to strengthen weak edges, and/or fill in edges where they are suggested. In addition, when a region encounters an edge voxel, we could tighten the growing threshold for the edge median blocks.
  • Post processing steps to compare the number of voxels to known heuristics for organ size, and extended these heuristics to find low-confidence voxel clumps to remove.
  • Since kidney cross-sections are generally ellipsoidal, a Hough transform could be used to search for these ellipsoids. This approach applied to a local region around questionable slices may allow a kidney to be found even its adjacent organ edge is non-existent.


    References
    [1] T. S. Newman, N. Tang, S. Bacharach, P. Choyke, "A Volumetric Technique for Diagnosis and Surgical Planning Lower Torso CT Images." 1015-4651/96 Proceedings of ICPR 1996.

    [2] B. Tsagaan, A. Shimizu, H. Kobatake, K. Miyakawa, Y. Hanzawa, "Segmentation of Kidney Using a Deformable Model," 7803-6725 Proceedings of the IEEE January 200.1