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Brief Biography:
BS Computer Eng, 2001-2004 (University of Michigan, Ann Arbor)
MS/PhD Computer Eng, 2005-present (Cornell University)
Research Interests:
Computer vision, Biomedical image analysis
Current Research Topic:
- Vessel Diameter Tracking
Manual diameter measurement in video microscopy in vivo is time consuming
and prone to measurement error. Automatic measurement provides for
faster and more accurate tracking of vessel diameter.
- Human Airway Analysis
Many pulmonary diseases affect the dimensions of airways. By measuring
the airway dimensions to a known precision, the clinicians will be
able to better diagnose and monitor the patients.
- 3D Point Mapping on Mouse Skull Micro-CT
Physical dimensions of the mouse skull is of interest in studying how the
skull's appearance is affected by certain gene. A convenient tool is
developed for mapping a 3D point on the skull surface.
- 3D Visualization using VTK
Visualization of human anatomy is a challenging task, especially
for 3D data. An user-friendly tool for 3D rendering of human anatomy
is developed using VTK (Visualization ToolKit).
Recent Presentations and Publications:
- J. Lee, A. P. Reeves, D. F. Yankelevitz, and C. I. Henschke.
Bronchial Segment Matching in Low-dose Lung CT Scan Pairs.
SPIE Medical Imaging, Feb 2009.
- J. Lee, A. P. Reeves, D. F. Yankelevitz, and C. I. Henschke.
Assessment of Airway Dimensions in Low-dose CT.
RSNA 94th Scientific Assembly and Annual Meeting, Nov 2008.
- J. Lee, A. P. Reeves, D. F. Yankelevitz, and C. I. Henschke.
Skewness Reduction Approach for Measuring Airway Wall Thickness.
International Journal of Computer Assisted Radiology and Surgery,
vol. 3, pp. S50-S52, June 2008.
- J. Lee, A. P. Reeves, S. Fotin, T. Apanasovich, and D. F. Yankelevitz.
Human Airway Measurement from CT Images.
Proceedings of SPIE Medical Imaging,
vol. 6915, pp. 691518, Feb 2008.
- J. Lee, A. P. Reeves, S. Fotin, T. Apanasovich, D. F. Yankelevitz,
and C. I. Henschke.
Precision of Automated Airway Measurements in CT Images.
RSNA 93rd Scientific Assembly and Annual Meeting, Nov. 2007.
- J. Lee, A. Jirapatnakul, A. P. Reeves, W. Crowe, and S. Sarelius.
Vessel Diameter Tracking in Intravital Microscopy Image Sequences.
IEEE International Symposium on Biomedical Imaging: From Macro to Nano, pp. 360-363, April 2007.
Courses:
- ECE473 Optimizing Compilers
- ECE696 Contemporary Issues in Computer Architecture
- ECE699 Memory Technologies and System
- ECE547 Computer Vision
- ECE578 Computer Analysis of Biomedical Images
- CS478 Machine Learning
- CS578 Empirical Methods in Machine Learning
- CS664 Machine Vision
- CS764 Visual Object Recognition
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